Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus 1110601896
NCBI Strain Identifiers 1110601896
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 6
tRNA Count 19
Contig Count 35
N50 Contigs 149,900 bp
Longest Contig 352,813 bp
Scaffold Count 29
N50 Scaffolds 279,067 bp
Longest Scaffold 476,046 bp
Genome Size 2,750,534 bp
Protein Count 2,531
Coding Density 82.66%
GC Percentage 32.89%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_1110601896_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02391246
Country Netherlands
Date 2014-4-23
Genbank Assembly Accession GCA_000636415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Bodily fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 2,786
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 6
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1413419
Total Gap Length 844
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJEE00000000.1