Haemophilus influenzae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Haemophilus; s__Haemophilus influenzae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Haemophilus; s__Haemophilus influenzae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Haemophilus; s__Haemophilus influenzae
NCBI Strain Identifiers 1104
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457655.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 16
N50 Contigs 247,076 bp
Longest Contig 508,640 bp
Scaffold Count 16
N50 Scaffolds 247,076 bp
Longest Scaffold 508,640 bp
Genome Size 1,803,206 bp
Protein Count 1,695
Coding Density 88.41%
GC Percentage 38.09%
Ambiguous Bases N/A
GTDB representative GCA_001457655.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name NTHi1104v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02678122
Country Spain: Barcelona; Hospital Universitari de Bellvitge
Date 2014-4-22
Genbank Assembly Accession GCA_000636075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source adult patient with underlying chronic lung disease
Latitude Longitude 41.34 N 2.10 E
Molecule Count N/A
CDS Count 1,735
Refseq Category na
Seq Rel Date 2014/04/22
Spanned Gaps 0
Species Taxid 727
SSU Count 7
Submitter University of British Columbia
Taxid 727
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFZM00000000.1