Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes; x__Streptococcus pyogenes ABC020056064
NCBI Strain Identifiers ABC020056064
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.55%
CheckM Strain Heterogeneity 100.0
5S Count 4
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 16
N50 Contigs 402,903 bp
Longest Contig 535,190 bp
Scaffold Count 10
N50 Scaffolds 1,065,069 bp
Longest Scaffold 1,065,069 bp
Genome Size 1,859,016 bp
Protein Count 1,848
Coding Density 86.50%
GC Percentage 38.46%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stre_pyog_ABC020056064_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02567417
Country USA
Date 2014-4-14
Genbank Assembly Accession GCA_000631245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,871
Refseq Category na
Seq Rel Date 2014/04/14
Spanned Gaps 6
Species Taxid 1314
SSU Count 2
Submitter Broad Institute
Taxid 1439261
Total Gap Length 5404
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJID00000000.1