Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes; x__Streptococcus pyogenes ABC020032523
NCBI Strain Identifiers ABC020032523
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 88.89
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 9
N50 Contigs 980,385 bp
Longest Contig 980,385 bp
Scaffold Count 8
N50 Scaffolds 980,385 bp
Longest Scaffold 980,385 bp
Genome Size 1,860,470 bp
Protein Count 1,758
Coding Density 85.58%
GC Percentage 38.59%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stre_pyog_ABC020032523_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02567490
Country USA
Date 2014-4-14
Genbank Assembly Accession GCA_000630665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,791
Refseq Category na
Seq Rel Date 2014/04/14
Spanned Gaps 1
Species Taxid 1314
SSU Count 7
Submitter Broad Institute
Taxid 1439073
Total Gap Length 100
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJHA00000000.1