Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes; x__Streptococcus pyogenes ABC020044188
NCBI Strain Identifiers ABC020044188
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 15
N50 Contigs 269,076 bp
Longest Contig 426,361 bp
Scaffold Count 10
N50 Scaffolds 1,053,821 bp
Longest Scaffold 1,053,821 bp
Genome Size 1,906,120 bp
Protein Count 1,914
Coding Density 86.26%
GC Percentage 38.52%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stre_pyog_ABC020044188_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02567513
Country USA
Date 2014-4-14
Genbank Assembly Accession GCA_000630545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,923
Refseq Category na
Seq Rel Date 2014/04/14
Spanned Gaps 5
Species Taxid 1314
SSU Count 5
Submitter Broad Institute
Taxid 1439133
Total Gap Length 2337
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJGU00000000.1