Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes; x__Streptococcus pyogenes ABC020052558
NCBI Strain Identifiers ABC020052558
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 8
N50 Contigs 259,779 bp
Longest Contig 619,452 bp
Scaffold Count 4
N50 Scaffolds 1,398,483 bp
Longest Scaffold 1,398,483 bp
Genome Size 1,902,745 bp
Protein Count 1,901
Coding Density 86.02%
GC Percentage 38.55%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stre_pyog_ABC020052558_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02567639
Country USA
Date 2014-4-14
Genbank Assembly Accession GCA_000629665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,917
Refseq Category na
Seq Rel Date 2014/04/14
Spanned Gaps 4
Species Taxid 1314
SSU Count 5
Submitter Broad Institute
Taxid 1439220
Total Gap Length 1287
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJFC00000000.1