Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa BWH033
NCBI Strain Identifiers BWH033
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 4
23S Count 5
tRNA Count 20
Contig Count 83
N50 Contigs 227,928 bp
Longest Contig 627,468 bp
Scaffold Count 82
N50 Scaffolds 227,928 bp
Longest Scaffold 627,468 bp
Genome Size 6,723,533 bp
Protein Count 6,201
Coding Density 89.21%
GC Percentage 65.97%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Pseu_aeru_BWH033_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02584699
Country USA: Brigham and Women s Hospital
Date 2014-4-14
Genbank Assembly Accession GCA_000629065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude None
Molecule Count N/A
CDS Count 6,361
Refseq Category na
Seq Rel Date 2014/04/14
Spanned Gaps 1
Species Taxid 287
SSU Count 4
Submitter Broad Institute
Taxid 1447541
Total Gap Length 100
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JIEA00000000.1