Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus; x__Staphylococcus aureus subsp. aureus 21239
NCBI Strain Identifiers 21239
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 60
N50 Contigs 171,373 bp
Longest Contig 485,760 bp
Scaffold Count 60
N50 Scaffolds 171,373 bp
Longest Scaffold 485,760 bp
Genome Size 2,753,226 bp
Protein Count 2,590
Coding Density 84.24%
GC Percentage 32.74%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name gsa21239v01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00116850
Country None
Date 2014-4-11
Genbank Assembly Accession GCA_000626795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,861
Refseq Category na
Seq Rel Date 2014/04/11
Spanned Gaps 0
Species Taxid 1280
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 904740
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JHPT00000000.1