Sulfitobacter donghicola
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Sulfitobacter; s__Sulfitobacter donghicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Sulfitobacter; s__Sulfitobacter donghicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Sulfitobacter; s__Sulfitobacter donghicola; x__Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565
NCBI Strain Identifiers KCTC 12864
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 9
N50 Contigs 3,276,862 bp
Longest Contig 3,276,862 bp
Scaffold Count 9
N50 Scaffolds 3,276,862 bp
Longest Scaffold 3,276,862 bp
Genome Size 3,540,159 bp
Protein Count 3,407
Coding Density 91.25%
GC Percentage 55.23%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name 12864_draft
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02721581
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000622405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source coastal seawater
Latitude Longitude None
Molecule Count N/A
CDS Count 3,389
Refseq Category representative genome
Seq Rel Date 2014/04/08
Spanned Gaps 0
Species Taxid 421000
SSU Count 2
Submitter Yonsei University
Taxid 1300350
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JASF00000000.1