Fusobacterium_B perfoetens
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Fusobacteriota; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium_B; s__Fusobacterium_B perfoetens
Filtered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium perfoetens
Unfiltered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium perfoetens; x__Fusobacterium perfoetens ATCC 29250
NCBI Strain Identifiers ATCC 29250
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.12%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 27
N50 Contigs 167,869 bp
Longest Contig 403,619 bp
Scaffold Count 25
N50 Scaffolds 215,137 bp
Longest Scaffold 571,914 bp
Genome Size 2,103,008 bp
Protein Count 1,948
Coding Density 90.76%
GC Percentage 25.97%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM62224v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743999
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000622245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,933
Refseq Category representative genome
Seq Rel Date 2014/04/08
Spanned Gaps 2
Species Taxid 852
SSU Count 8
Submitter DOE Joint Genome Institute
Taxid 1408439
Total Gap Length 811
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JHXW00000000.1