Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__NK4A144; s__NK4A144 sp000621405
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; x__unclassified Lachnospiraceae; s__Lachnospiraceae bacterium AC3007
NCBI Strain Identifiers AC3007
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.21%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 18
Contig Count 55
N50 Contigs 123,576 bp
Longest Contig 257,266 bp
Scaffold Count 51
N50 Scaffolds 137,835 bp
Longest Scaffold 353,764 bp
Genome Size 2,944,241 bp
Protein Count 2,650
Coding Density 91.52%
GC Percentage 47.63%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM62140v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743990
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000621405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,619
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 4
Species Taxid 1408322
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1408322
Total Gap Length 1856
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JHYK00000000.1