Campylobacter_D cuniculorum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D cuniculorum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter cuniculorum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter cuniculorum; x__Campylobacter cuniculorum DSM 23162 = LMG 24588
NCBI Strain Identifiers DSM 23162
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_002104335.1)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 46
N50 Contigs 83,241 bp
Longest Contig 198,523 bp
Scaffold Count 44
N50 Scaffolds 84,712 bp
Longest Scaffold 320,480 bp
Genome Size 1,871,412 bp
Protein Count 1,874
Coding Density 89.02%
GC Percentage 31.24%
Ambiguous Bases N/A
GTDB representative GCA_002104335.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM62100v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743970
Country Italy
Date 2014-04-08
Genbank Assembly Accession GCA_000621005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,848
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 2
Species Taxid 374106
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1121267
Total Gap Length 2856
Translation Table 11
tRNA Count (total) 40
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JHZL00000000.1