Exiguobacterium_A undae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Exiguobacterales; f__Exiguobacteraceae; g__Exiguobacterium_A; s__Exiguobacterium_A undae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__; g__Exiguobacterium; s__Exiguobacterium undae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; x__Bacillales incertae sedis; x__Bacillales Family XII. Incertae Sedis; g__Exiguobacterium; s__Exiguobacterium undae; x__Exiguobacterium undae 190-11
NCBI Strain Identifiers 190-11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000620805.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 9
N50 Contigs 1,643,017 bp
Longest Contig 1,643,017 bp
Scaffold Count 4
N50 Scaffolds 3,125,168 bp
Longest Scaffold 3,125,168 bp
Genome Size 3,208,506 bp
Protein Count 3,233
Coding Density 88.78%
GC Percentage 47.80%
Ambiguous Bases N/A
GTDB representative GCA_000620805.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM62082v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743959
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000620825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,178
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 5
Species Taxid 169177
SSU Count 5
Submitter DOE Joint Genome Institute
Taxid 1397695
Total Gap Length 17285
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JHZU00000000.1