Desulfovermiculus halophilus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Desulfobacterota; c__Desulfovibrionia; o__Desulfovibrionales; f__Desulfohalobiaceae; g__Desulfovermiculus; s__Desulfovermiculus halophilus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Deltaproteobacteria; o__Desulfovibrionales; f__Desulfohalobiaceae; g__Desulfovermiculus; s__Desulfovermiculus halophilus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Deltaproteobacteria; o__Desulfovibrionales; f__Desulfohalobiaceae; g__Desulfovermiculus; s__Desulfovermiculus halophilus; x__Desulfovermiculus halophilus DSM 18834
NCBI Strain Identifiers DSM 18834
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.11%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 75
N50 Contigs 97,131 bp
Longest Contig 271,220 bp
Scaffold Count 71
N50 Scaffolds 106,214 bp
Longest Scaffold 295,152 bp
Genome Size 3,242,094 bp
Protein Count 2,959
Coding Density 85.33%
GC Percentage 56.82%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM62076v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743957
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000620765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,982
Refseq Category representative genome
Seq Rel Date 2014/04/08
Spanned Gaps 4
Species Taxid 339722
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1121433
Total Gap Length 490
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JIAK00000000.1