Blastococcus sp000620185
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Geodermatophilaceae; g__Blastococcus; s__Blastococcus sp000620185
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Geodermatophilales; f__Geodermatophilaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Geodermatophilales; f__Geodermatophilaceae; x__unclassified Geodermatophilaceae; s__Geodermatophilaceae bacterium URHB0062
NCBI Strain Identifiers URHB0062
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 0.24%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 26
N50 Contigs 281,272 bp
Longest Contig 650,511 bp
Scaffold Count 23
N50 Scaffolds 424,597 bp
Longest Scaffold 933,841 bp
Genome Size 5,093,035 bp
Protein Count 4,796
Coding Density 90.33%
GC Percentage 72.60%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM62018v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02952994
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000620185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,744
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 3
Species Taxid 1380353
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1380353
Total Gap Length 170
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JHVO00000000.1