Escherichia dysenteriae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli O157:H7; x__Escherichia coli O157:H7 str. F6751
NCBI Strain Identifiers F6751
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 269
N50 Contigs 102,799 bp
Longest Contig 299,260 bp
Scaffold Count 191
N50 Scaffolds 146,435 bp
Longest Scaffold 374,874 bp
Genome Size 5,335,534 bp
Protein Count 5,149
Coding Density 87.05%
GC Percentage 50.26%
Ambiguous Bases 21
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name EcF6751
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02353077
Country USA
Date 2014-4-8
Genbank Assembly Accession GCA_000618265.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,664
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 78
Species Taxid 562
SSU Count 1
Submitter CDC
Taxid 1446655
Total Gap Length 13296
Translation Table 11
tRNA Count (total) 76
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JHJO00000000.1