Bacillus_AT mannanilyticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_I; c__Bacilli_A; o__Caldalkalibacillales; f__Caldalkalibacillaceae; g__Bacillus_AT; s__Bacillus_AT mannanilyticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus mannanilyticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus mannanilyticus; x__Bacillus mannanilyticus JCM 10596
NCBI Strain Identifiers JCM 10596
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 95.38%
CheckM Contamination 2.18%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 108
N50 Contigs 83,087 bp
Longest Contig 216,565 bp
Scaffold Count 108
N50 Scaffolds 83,087 bp
Longest Scaffold 216,565 bp
Genome Size 4,534,596 bp
Protein Count 4,866
Coding Density 88.77%
GC Percentage 39.61%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM61594v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00012480
Country None
Date 2014-3-31
Genbank Assembly Accession GCA_000615945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,422
Refseq Category representative genome
Seq Rel Date 2014/03/31
Spanned Gaps 0
Species Taxid 1418
SSU Count 1
Submitter The University of Tokyo
Taxid 1236954
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAMO00000000.1