Ligilactobacillus hayakitensis
Isolate HQ 5S/16S/23S 19 tRNAs
Genome Characteristics
CheckM Completeness 96.23%
CheckM Contamination 0.52%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 82
N50 Contigs 42,958 bp
Longest Contig 123,911 bp
Scaffold Count 82
N50 Scaffolds 42,958 bp
Longest Scaffold 123,911 bp
Genome Size 1,667,319 bp
Protein Count 1,692
Coding Density 87.27%
GC Percentage 33.98%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM61584v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00008721
Country None
Date 2014-03-31
Genbank Assembly Accession GCA_000615845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,602
Refseq Category representative genome
Seq Rel Date 2014/03/31
Spanned Gaps 0
Species Taxid 396716
SSU Count 1
Submitter The University of Tokyo
Taxid 1423755
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAML00000000.1