Prevotella aurantiaca
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella aurantiaca
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella aurantiaca
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella aurantiaca; x__Prevotella aurantiaca JCM 15754
NCBI Strain Identifiers JCM 15754
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.57%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 148
N50 Contigs 59,497 bp
Longest Contig 216,539 bp
Scaffold Count 148
N50 Scaffolds 59,497 bp
Longest Scaffold 216,539 bp
Genome Size 3,002,170 bp
Protein Count 2,824
Coding Density 84.07%
GC Percentage 38.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM61402v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00012187
Country None
Date 2014-03-31
Genbank Assembly Accession GCA_000614025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,577
Refseq Category representative genome
Seq Rel Date 2014/03/31
Spanned Gaps 0
Species Taxid 596085
SSU Count 1
Submitter The University of Tokyo
Taxid 1236508
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAKF00000000.1