Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Asaia; s__Asaia prunellae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Asaia; s__Asaia prunellae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Asaia; s__Asaia prunellae; x__Asaia prunellae JCM 25354
NCBI Strain Identifiers JCM 25354
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 93.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 192,977 bp
Longest Contig 319,827 bp
Scaffold Count 38
N50 Scaffolds 192,977 bp
Longest Scaffold 319,827 bp
Genome Size 3,182,743 bp
Protein Count 3,453
Coding Density 88.88%
GC Percentage 55.76%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM61388v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00004065
Country None
Date 2014-03-31
Genbank Assembly Accession GCA_000613885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,923
Refseq Category na
Seq Rel Date 2014/03/31
Spanned Gaps 0
Species Taxid 610245
SSU Count 1
Submitter The University of Tokyo
Taxid 1236502
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAJV00000000.1