Prevotella denticola
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella denticola
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella denticola
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella denticola; x__Prevotella denticola DSM 20614 = JCM 13449
NCBI Strain Identifiers JCM 13449
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (7 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.02%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 6
tRNA Count 19
Contig Count 82
N50 Contigs 148,597 bp
Longest Contig 370,838 bp
Scaffold Count 82
N50 Scaffolds 148,597 bp
Longest Scaffold 370,838 bp
Genome Size 3,111,749 bp
Protein Count 2,833
Coding Density 84.43%
GC Percentage 49.99%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM61358v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00003335
Country None
Date 2014-03-31
Genbank Assembly Accession GCA_000613585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,532
Refseq Category na
Seq Rel Date 2014/03/31
Spanned Gaps 0
Species Taxid 28129
SSU Count 1
Submitter The University of Tokyo
Taxid 1122982
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAJG00000000.1