Stenotrophomonas indicatrix
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas indicatrix
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia; x__Stenotrophomonas maltophilia SeITE02
NCBI Strain Identifiers SeITE02
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002750975.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 63
N50 Contigs 133,603 bp
Longest Contig 366,024 bp
Scaffold Count 63
N50 Scaffolds 133,603 bp
Longest Scaffold 366,024 bp
Genome Size 4,557,111 bp
Protein Count 4,091
Coding Density 89.28%
GC Percentage 66.39%
Ambiguous Bases 39
GTDB representative GCA_002750975.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stenotrophomonas_maltophilia_SeITE02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138997
Country None
Date 2014-04-01
Genbank Assembly Accession GCA_000613205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,091
Refseq Category na
Seq Rel Date 2014/04/01
Spanned Gaps 0
Species Taxid 40324
SSU Count 2
Submitter BIOCAT
Taxid 1407502
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBXW000000000.1