Listeria monocytogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes; x__Listeria monocytogenes R479a
NCBI Strain Identifiers R479a
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.82%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 2
N50 Contigs 2,944,998 bp
Longest Contig 2,944,998 bp
Scaffold Count 2
N50 Scaffolds 2,944,998 bp
Longest Scaffold 2,944,998 bp
Genome Size 3,031,650 bp
Protein Count 2,985
Coding Density 89.20%
GC Percentage 37.91%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name R479A_18022011
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138991
Country None
Date 2014-3-23
Genbank Assembly Accession GCA_000613085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 3,028
Refseq Category na
Seq Rel Date 2014/03/23
Spanned Gaps 0
Species Taxid 1639
SSU Count 5
Taxid 1437838
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None