Bordetella holmesii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Bordetella; s__Bordetella holmesii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Bordetella; s__Bordetella holmesii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Bordetella; s__Bordetella holmesii; x__Bordetella holmesii ATCC 51541
NCBI Strain Identifiers ATCC 51541
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (33 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.18%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 3,699,674 bp
Longest Contig 3,699,674 bp
Scaffold Count 1
N50 Scaffolds 3,699,674 bp
Longest Scaffold 3,699,674 bp
Genome Size 3,699,674 bp
Protein Count 3,863
Coding Density 89.83%
GC Percentage 62.69%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM61248v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02189846
Country None
Date 2014-4-4
Genbank Assembly Accession GCA_000612485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,574
Refseq Category representative genome
Seq Rel Date 2014/04/04
Spanned Gaps 0
Species Taxid 35814
SSU Count 3
Submitter Institute for Genome Sciences
Taxid 1247649
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None