Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis
NCBI Strain Identifiers Durban
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 2
N50 Contigs 4,678,926 bp
Longest Contig 4,678,926 bp
Scaffold Count 2
N50 Scaffolds 4,678,926 bp
Longest Scaffold 4,678,926 bp
Genome Size 4,738,298 bp
Protein Count 4,434
Coding Density 86.81%
GC Percentage 52.17%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM61232v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02712059
Country South Africa: Durban
Date 2014-4-4
Genbank Assembly Accession GCA_000612325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 29.85 S 31.01 E
Molecule Count 2
CDS Count 4,713
Refseq Category na
Seq Rel Date 2014/04/04
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter University of Pittsburgh
Taxid 149539
Total Gap Length 0
Translation Table 11
tRNA Count (total) 83
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None