Stenotrophomonas maltophilia_F
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_F
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia; x__Stenotrophomonas maltophilia M30
NCBI Strain Identifiers M30
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000284595.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.68%
CheckM Strain Heterogeneity 25.0
5S Count 3
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 193
N50 Contigs 46,399 bp
Longest Contig 142,025 bp
Scaffold Count 193
N50 Scaffolds 46,399 bp
Longest Scaffold 142,025 bp
Genome Size 4,902,008 bp
Protein Count 4,543
Coding Density 88.77%
GC Percentage 66.37%
Ambiguous Bases N/A
GTDB representative GCA_000284595.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM61173v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02592618
Country Spain: Mediterranean region
Date 2014-5-16
Genbank Assembly Accession GCA_000611735.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source decubitus ulcer
Latitude Longitude 41.27 N 2.15 E
Molecule Count N/A
CDS Count 4,528
Refseq Category na
Seq Rel Date 2014/05/16
Spanned Gaps 0
Species Taxid 40324
SSU Count 3
Submitter IBB, Autonomous University of Barcelona.
Taxid 1451188
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JELS00000000.2