Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR5869
NCBI Strain Identifiers DAR5869
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 6
tRNA Count 20
Contig Count 42
N50 Contigs 317,998 bp
Longest Contig 460,612 bp
Scaffold Count 32
N50 Scaffolds 471,657 bp
Longest Scaffold 569,736 bp
Genome Size 2,963,554 bp
Protein Count 2,778
Coding Density 83.19%
GC Percentage 32.86%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR5869_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403859
Country Chile
Date 2014-3-28
Genbank Assembly Accession GCA_000611005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 3,049
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 10
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1422309
Total Gap Length 10974
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGUT00000000.1