Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR3152
NCBI Strain Identifiers DAR3152
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 29
N50 Contigs 387,741 bp
Longest Contig 505,124 bp
Scaffold Count 16
N50 Scaffolds 695,809 bp
Longest Scaffold 1,135,515 bp
Genome Size 2,981,037 bp
Protein Count 2,796
Coding Density 82.94%
GC Percentage 32.92%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR3152_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403832
Country Argentina
Date 2014-3-28
Genbank Assembly Accession GCA_000610485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Osteomyelitis
Latitude Longitude None
Molecule Count N/A
CDS Count 3,055
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 13
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1422282
Total Gap Length 8668
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGTT00000000.1