Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR1813
NCBI Strain Identifiers DAR1813
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 8
N50 Contigs 685,572 bp
Longest Contig 1,033,230 bp
Scaffold Count 2
N50 Scaffolds 2,218,942 bp
Longest Scaffold 2,218,942 bp
Genome Size 2,715,530 bp
Protein Count 2,453
Coding Density 83.13%
GC Percentage 32.86%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR1813_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403795
Country USA: NY
Date 2014-3-28
Genbank Assembly Accession GCA_000609765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,720
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 6
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1422245
Total Gap Length 1335
Translation Table 11
tRNA Count (total) 92
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGSJ00000000.1