Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR5873
NCBI Strain Identifiers DAR5873
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 24
N50 Contigs 399,558 bp
Longest Contig 750,382 bp
Scaffold Count 14
N50 Scaffolds 1,597,194 bp
Longest Scaffold 1,597,194 bp
Genome Size 2,918,430 bp
Protein Count 2,745
Coding Density 83.65%
GC Percentage 32.78%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR5873_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403759
Country Colombia
Date 2014-3-28
Genbank Assembly Accession GCA_000609045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 3,010
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 10
Species Taxid 1280
SSU Count 3
Submitter Broad Institute
Taxid 1422209
Total Gap Length 5429
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGQZ00000000.1