Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR3840
NCBI Strain Identifiers DAR3840
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 8
tRNA Count 19
Contig Count 15
N50 Contigs 496,910 bp
Longest Contig 952,704 bp
Scaffold Count 9
N50 Scaffolds 570,341 bp
Longest Scaffold 1,401,891 bp
Genome Size 2,861,954 bp
Protein Count 2,648
Coding Density 83.53%
GC Percentage 32.88%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR3840_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403724
Country USA: MS
Date 2014-3-28
Genbank Assembly Accession GCA_000608365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,921
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 6
Species Taxid 1280
SSU Count 8
Submitter Broad Institute
Taxid 1422174
Total Gap Length 2950
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGPR00000000.1