Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR3627
NCBI Strain Identifiers DAR3627
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.36%
CheckM Strain Heterogeneity 75.0
5S Count 0
16S Count 4
23S Count 6
tRNA Count 20
Contig Count 11
N50 Contigs 571,289 bp
Longest Contig 926,460 bp
Scaffold Count 9
N50 Scaffolds 571,289 bp
Longest Scaffold 1,293,144 bp
Genome Size 2,888,532 bp
Protein Count 2,682
Coding Density 83.66%
GC Percentage 32.80%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR3627_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403702
Country USA: MS
Date 2014-3-28
Genbank Assembly Accession GCA_000607945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urethra
Latitude Longitude None
Molecule Count N/A
CDS Count 2,949
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 2
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1422152
Total Gap Length 1516
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGOW00000000.1