Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR3613
NCBI Strain Identifiers DAR3613
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 29
N50 Contigs 690,261 bp
Longest Contig 837,812 bp
Scaffold Count 13
N50 Scaffolds 900,437 bp
Longest Scaffold 1,037,912 bp
Genome Size 2,951,659 bp
Protein Count 2,756
Coding Density 82.91%
GC Percentage 32.89%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR3613_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403698
Country USA: MS
Date 2014-3-28
Genbank Assembly Accession GCA_000607865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 3,036
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 16
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1422148
Total Gap Length 15753
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGOS00000000.1