Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR3609
NCBI Strain Identifiers DAR3609
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 9
tRNA Count 20
Contig Count 45
N50 Contigs 290,814 bp
Longest Contig 454,834 bp
Scaffold Count 36
N50 Scaffolds 684,842 bp
Longest Scaffold 852,982 bp
Genome Size 2,928,571 bp
Protein Count 2,727
Coding Density 83.36%
GC Percentage 32.83%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR3609_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403696
Country USA: MS
Date 2014-3-28
Genbank Assembly Accession GCA_000607825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 3,005
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 9
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1422146
Total Gap Length 12431
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGOQ00000000.1