Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR3534
NCBI Strain Identifiers DAR3534
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 13
N50 Contigs 436,340 bp
Longest Contig 852,111 bp
Scaffold Count 6
N50 Scaffolds 2,176,187 bp
Longest Scaffold 2,176,187 bp
Genome Size 2,821,312 bp
Protein Count 2,576
Coding Density 82.99%
GC Percentage 32.76%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR3534_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403674
Country USA: MS
Date 2014-3-28
Genbank Assembly Accession GCA_000607385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Clinical specimen
Latitude Longitude None
Molecule Count N/A
CDS Count 2,839
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 7
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1422124
Total Gap Length 8056
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGNU00000000.1