Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus H22632
NCBI Strain Identifiers H22632
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.87%
CheckM Strain Heterogeneity 80.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 19
Contig Count 36
N50 Contigs 161,613 bp
Longest Contig 512,747 bp
Scaffold Count 34
N50 Scaffolds 167,960 bp
Longest Scaffold 512,747 bp
Genome Size 2,837,615 bp
Protein Count 2,649
Coding Density 83.79%
GC Percentage 32.74%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_H22632_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02402517
Country USA: Irvine; CA
Date 2014-3-28
Genbank Assembly Accession GCA_000605025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 2,905
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 2
Species Taxid 1280
SSU Count 3
Submitter Broad Institute
Taxid 1418304
Total Gap Length 354
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGJJ00000000.1