Staphylococcus aureus
Isolate HQ 16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus H15911
NCBI Strain Identifiers H15911
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 3
tRNA Count 17
Contig Count 52
N50 Contigs 174,989 bp
Longest Contig 443,401 bp
Scaffold Count 48
N50 Scaffolds 175,028 bp
Longest Scaffold 524,818 bp
Genome Size 2,864,801 bp
Protein Count 2,693
Coding Density 83.73%
GC Percentage 32.81%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_H15911_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02402512
Country USA: Irvine; CA
Date 2014-3-28
Genbank Assembly Accession GCA_000604985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 2,948
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 4
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1418299
Total Gap Length 565
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGJH00000000.1