Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F63712
NCBI Strain Identifiers F63712
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.92%
CheckM Strain Heterogeneity 33.33
5S Count 0
16S Count 5
23S Count 4
tRNA Count 19
Contig Count 59
N50 Contigs 95,807 bp
Longest Contig 181,669 bp
Scaffold Count 46
N50 Scaffolds 149,027 bp
Longest Scaffold 252,082 bp
Genome Size 2,918,805 bp
Protein Count 2,747
Coding Density 83.38%
GC Percentage 32.75%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_F63712_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02398753
Country USA: Irvine; CA
Date 2014-3-28
Genbank Assembly Accession GCA_000604525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,044
Refseq Category na
Seq Rel Date 2014/03/28
Spanned Gaps 13
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1417061
Total Gap Length 1300
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGIK00000000.1