Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. N18440
NCBI Strain Identifiers N18440
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 1
23S Count 4
tRNA Count 18
Contig Count 209
N50 Contigs 87,156 bp
Longest Contig 335,421 bp
Scaffold Count 209
N50 Scaffolds 87,156 bp
Longest Scaffold 335,421 bp
Genome Size 4,927,857 bp
Protein Count 4,768
Coding Density 87.37%
GC Percentage 52.11%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM60388v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01088026
Country USA: MD
Date 2014-03-27
Genbank Assembly Accession GCA_000603885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ground turkey
Latitude Longitude None
Molecule Count N/A
CDS Count 5,084
Refseq Category na
Seq Rel Date 2014/03/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 1128968
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMNT00000000.1