Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. N18413
NCBI Strain Identifiers N18413
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.61%
CheckM Contamination 1.44%
CheckM Strain Heterogeneity 33.33
5S Count 7
16S Count 2
23S Count 5
tRNA Count 20
Contig Count 169
N50 Contigs 79,742 bp
Longest Contig 199,914 bp
Scaffold Count 169
N50 Scaffolds 79,742 bp
Longest Scaffold 199,914 bp
Genome Size 4,877,997 bp
Protein Count 4,722
Coding Density 87.58%
GC Percentage 52.15%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM60386v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01088025
Country USA: GA
Date 2014-03-27
Genbank Assembly Accession GCA_000603865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ground turkey
Latitude Longitude None
Molecule Count N/A
CDS Count 5,000
Refseq Category na
Seq Rel Date 2014/03/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 2
Submitter FDA
Taxid 1128967
Total Gap Length 0
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMNS00000000.1