Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. CVM20752
NCBI Strain Identifiers CVM20752
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 132
N50 Contigs 98,394 bp
Longest Contig 225,272 bp
Scaffold Count 132
N50 Scaffolds 98,394 bp
Longest Scaffold 225,272 bp
Genome Size 4,986,798 bp
Protein Count 4,853
Coding Density 87.45%
GC Percentage 51.85%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM60384v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01088024
Country USA: MO
Date 2014-03-27
Genbank Assembly Accession GCA_000603845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source turkey
Latitude Longitude None
Molecule Count N/A
CDS Count 5,074
Refseq Category na
Seq Rel Date 2014/03/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 4
Submitter FDA
Taxid 1124948
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMNR00000000.1