Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. N19871
NCBI Strain Identifiers N19871
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 2
23S Count 3
tRNA Count 18
Contig Count 61
N50 Contigs 230,858 bp
Longest Contig 566,959 bp
Scaffold Count 61
N50 Scaffolds 230,858 bp
Longest Scaffold 566,959 bp
Genome Size 4,873,287 bp
Protein Count 4,639
Coding Density 87.57%
GC Percentage 52.15%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM60354v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01088009
Country USA: NY
Date 2014-03-27
Genbank Assembly Accession GCA_000603545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ground turkey
Latitude Longitude None
Molecule Count N/A
CDS Count 4,937
Refseq Category na
Seq Rel Date 2014/03/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 2
Submitter FDA
Taxid 1124938
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMNC00000000.1