Staphylococcus aureus
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus W82238
NCBI Strain Identifiers W82238
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 5
tRNA Count 18
Contig Count 77
N50 Contigs 83,526 bp
Longest Contig 258,712 bp
Scaffold Count 77
N50 Scaffolds 83,526 bp
Longest Scaffold 258,712 bp
Genome Size 2,874,908 bp
Protein Count 2,721
Coding Density 84.07%
GC Percentage 32.82%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stap_aure_W82238_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403203
Country USA: Irvine; CA
Date 2014-3-27
Genbank Assembly Accession GCA_000603265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,973
Refseq Category na
Seq Rel Date 2014/03/27
Spanned Gaps 0
Species Taxid 1280
SSU Count 3
Submitter Broad Institute
Taxid 1421913
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGIH00000000.1