Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus T25283
NCBI Strain Identifiers T25283
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 24
N50 Contigs 296,987 bp
Longest Contig 716,377 bp
Scaffold Count 24
N50 Scaffolds 296,987 bp
Longest Scaffold 716,377 bp
Genome Size 2,886,697 bp
Protein Count 2,684
Coding Density 83.47%
GC Percentage 32.72%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stap_aure_T25283_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02398888
Country USA: Irvine; CA
Date 2014-3-27
Genbank Assembly Accession GCA_000601725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,974
Refseq Category na
Seq Rel Date 2014/03/27
Spanned Gaps 0
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1417196
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGFI00000000.1