Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Actinomycetaceae; g__Trueperella; s__Trueperella pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Trueperella; s__Trueperella pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Trueperella; s__Trueperella pyogenes; x__Trueperella pyogenes MS249
NCBI Strain Identifiers MS249
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460345.1)
Genome Characteristics
CheckM Completeness 99.14%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 19
Contig Count 142
N50 Contigs 42,747 bp
Longest Contig 182,350 bp
Scaffold Count 142
N50 Scaffolds 42,747 bp
Longest Scaffold 182,350 bp
Genome Size 2,216,617 bp
Protein Count 2,045
Coding Density 90.57%
GC Percentage 59.85%
Ambiguous Bases N/A
GTDB representative GCA_900460345.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name TruePyoMS2391.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02951934
Country United Kingdom
Date 2014-03-21
Genbank Assembly Accession GCA_000599565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source uterus of a cow with metritis
Latitude Longitude None
Molecule Count N/A
CDS Count 1,986
Refseq Category na
Seq Rel Date 2014/03/21
Spanned Gaps 0
Species Taxid 1661
SSU Count 1
Submitter iPUD
Taxid 1448141
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JALQ00000000.1