Bacteroides fragilis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis; x__Bacteroides fragilis str. 3397 T14
NCBI Strain Identifiers 3397 T14
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000025985.1)
Genome Characteristics
CheckM Completeness 99.26%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 1
23S Count 6
tRNA Count 20
Contig Count 94
N50 Contigs 148,019 bp
Longest Contig 424,528 bp
Scaffold Count 94
N50 Scaffolds 148,019 bp
Longest Scaffold 424,528 bp
Genome Size 5,238,350 bp
Protein Count 4,410
Coding Density 89.05%
GC Percentage 43.30%
Ambiguous Bases N/A
GTDB representative GCA_000025985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM59916v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02314520
Country None
Date 2014-3-20
Genbank Assembly Accession GCA_000599165.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,600
Refseq Category na
Seq Rel Date 2014/03/20
Spanned Gaps 0
Species Taxid 817
SSU Count 2
Submitter IGS
Taxid 1339299
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGDO00000000.1