Bacteroides fragilis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis; x__Bacteroides fragilis str. S24L26
NCBI Strain Identifiers S24L26
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000025985.1)
Genome Characteristics
CheckM Completeness 98.88%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 4
23S Count 2
tRNA Count 19
Contig Count 72
N50 Contigs 286,209 bp
Longest Contig 726,158 bp
Scaffold Count 72
N50 Scaffolds 286,209 bp
Longest Scaffold 726,158 bp
Genome Size 5,273,785 bp
Protein Count 4,379
Coding Density 88.94%
GC Percentage 43.11%
Ambiguous Bases N/A
GTDB representative GCA_000025985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM59874v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02314565
Country None
Date 2014-3-20
Genbank Assembly Accession GCA_000598745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,608
Refseq Category na
Seq Rel Date 2014/03/20
Spanned Gaps 0
Species Taxid 817
SSU Count 4
Submitter IGS
Taxid 1339324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 76
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGEN00000000.1