Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR5829
NCBI Strain Identifiers DAR5829
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 19
Contig Count 73
N50 Contigs 96,647 bp
Longest Contig 329,117 bp
Scaffold Count 73
N50 Scaffolds 96,647 bp
Longest Scaffold 329,117 bp
Genome Size 2,889,993 bp
Protein Count 2,736
Coding Density 84.01%
GC Percentage 32.78%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stap_aure_DAR5829_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403895
Country Colombia
Date 2014-3-11
Genbank Assembly Accession GCA_000595765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Peritoneal fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 2,997
Refseq Category na
Seq Rel Date 2014/03/11
Spanned Gaps 0
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1422345
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFQE00000000.1