Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR5827
NCBI Strain Identifiers DAR5827
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.71%
CheckM Strain Heterogeneity 33.33
5S Count 0
16S Count 4
23S Count 4
tRNA Count 19
Contig Count 67
N50 Contigs 82,339 bp
Longest Contig 323,820 bp
Scaffold Count 67
N50 Scaffolds 82,339 bp
Longest Scaffold 323,820 bp
Genome Size 2,846,865 bp
Protein Count 2,672
Coding Density 83.88%
GC Percentage 32.78%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stap_aure_DAR5827_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403897
Country Colombia
Date 2014-3-11
Genbank Assembly Accession GCA_000595725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Post surgical secretion
Latitude Longitude None
Molecule Count N/A
CDS Count 2,922
Refseq Category na
Seq Rel Date 2014/03/11
Spanned Gaps 0
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1422347
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFQC00000000.1