Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F23347
NCBI Strain Identifiers F23347
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 6
tRNA Count 20
Contig Count 19
N50 Contigs 553,712 bp
Longest Contig 1,151,601 bp
Scaffold Count 19
N50 Scaffolds 553,712 bp
Longest Scaffold 1,151,601 bp
Genome Size 2,931,950 bp
Protein Count 2,730
Coding Density 83.41%
GC Percentage 32.67%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stap_aure_F23347_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02385368
Country USA: Irvine; CA
Date 2014-2-14
Genbank Assembly Accession GCA_000594445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 3,012
Refseq Category na
Seq Rel Date 2014/02/14
Spanned Gaps 0
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1412628
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDZP00000000.1